MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2821c · 23 genes shown · anchor csm2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 Rv2825c (dark) — hypothetical protein Rv2825c lipF (requalified) — carboxylesterase LipF lipF Rv2828c (family_assigned) — DUF1802 family protein Rv2828c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0517 (requalified) — acyltransferase Rv0517 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c lipY (requalified) — triacylglycerol lipase Lip lipY rpmD (requalified) — 50S ribosomal protein L30 rpmD lepB (requalified) — signal peptidase I lepB Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.