MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2818c · 37 genes shown · anchor csm5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv1191 (family_assigned) — alpha/beta hydrolase Rv1191 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c menJ (requalified) — menaquinone reductase menJ Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c Rv1192 (family_assigned) — alpha/beta hydrolase Rv1192 fadD36 (requalified) — acyl-CoA synthetase fadD36 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1874 (family_assigned) — hypothetical protein Rv1874

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.