MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2817c · 37 genes shown · anchor cas2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 Rv1752 (family_assigned) — hypothetical protein Rv1752 hupB (family_assigned) — DNA-binding protein HupB hupB lprD (family_assigned) — hypothetical protein lprD glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c galK (requalified) — galactokinase galK Rv1751 (requalified) — oxidoreductase Rv1751 Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2843 (family_assigned) — hypothetical protein Rv2843 rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsT (requalified) — 30S ribosomal protein S20 rpsT pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rplS (requalified) — 50S ribosomal protein L19 rplS tuf (requalified) — elongation factor Tu tuf leuD (family_assigned) — 3-isopropylmalate dehydratase small subunit leuD Rv1342c (family_assigned) — hypothetical protein Rv1342c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0049 (dark) — hypothetical protein Rv0049 Rv0358 (requalified) — peptidase M50 Rv0358 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 glgA (requalified) — glycogen synthase glgA glgP (family_assigned) — glycosyltransferase family 1 protein glgP glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB malQ (requalified) — 4-alpha-glucanotransferase malQ pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.