MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2800 · 38 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 Rv2799 (family_assigned) — membrane protein Rv2799 Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2797c (family_assigned) — alpha/beta hydrolase family protein Rv2797c Rv2798c (family_assigned) — hypothetical protein Rv2798c lppV (family_assigned) — LppA family lipoprotein lppV pptT (requalified) — 4'-phosphopantetheinyl transferase pptT truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2795c (requalified) — metallophosphoesterase Rv2795c ltp1 (requalified) — lipid-transfer protein ltp1 Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c PE14 (family_assigned) — PE family protein PE14 PE14 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK iniB (requalified) — isoniazid-induced protein IniB iniB PPE55 (family_assigned) — PPE family protein PPE55 PPE55 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu fadB (requalified) — fatty oxidation protein FadB fadB fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.