MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2789c · 45 genes shown · anchor ltp1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 ltp1 (requalified) — lipid-transfer protein ltp1 tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadB (requalified) — fatty oxidation protein FadB fadB truB (requalified) — tRNA pseudouridine(55) synthase TruB truB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 folP1 (requalified) — dihydropteroate synthase folP1 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv2979c (family_assigned) — IS607 family transposase Rv2979c Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv3827c (requalified) — transposase Rv3827c Rv2885c (requalified) — transposase Rv2885c fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks13 (requalified) — polyketide synthase Pks13 pks13 Rv2799 (family_assigned) — membrane protein Rv2799 Rv2798c (family_assigned) — hypothetical protein Rv2798c fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.