MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2788 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c cobB (requalified) — NAD-dependent protein deacylase cobB Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c mmr (requalified) — multidrug resistance protein Mmr mmr Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 nadE (requalified) — NAD(+) synthase nadE pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c ppnK (requalified) — NAD kinase ppnK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.