MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2786c · 46 genes shown · anchor truB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rpsO (requalified) — 30S ribosomal protein S15 rpsO lppU (dark) — hypothetical protein lppU cmk (requalified) — (d)CMP kinase cmk sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pepR (family_assigned) — pitrilysin family protein pepR kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv2787 (family_assigned) — AAA family ATPase Rv2787 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplU (requalified) — 50S ribosomal protein L21 rplU Rv2781c (requalified) — nitronate monooxygenase Rv2781c engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD rplC (requalified) — 50S ribosomal protein L3 rplC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.