MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2783c · 46 genes shown · anchor pepR · open gene page → · ← back to 1 hop

Evidence: Min score 0
gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD pepR (family_assigned) — pitrilysin family protein pepR rplC (requalified) — 50S ribosomal protein L3 rplC rho (requalified) — transcription termination factor Rho rho rplT (requalified) — 50S ribosomal protein L20 rplT rplB (requalified) — 50S ribosomal protein L2 rplB nusA (requalified) — transcription termination factor NusA nusA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rne (family_assigned) — Rne/Rng family ribonuclease rne rpsD (requalified) — 30S ribosomal protein S4 rpsD Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplM (requalified) — 50S ribosomal protein L13 rplM Rv3212 (family_assigned) — hypothetical protein Rv3212 rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplF (requalified) — 50S ribosomal protein L6 rplF yidC (requalified) — membrane protein insertase YidC yidC rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpsE (requalified) — 30S ribosomal protein S5 rpsE rplX (requalified) — 50S ribosomal protein L24 rplX rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsT (requalified) — 30S ribosomal protein S20 rpsT rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsO (requalified) — 30S ribosomal protein S15 rpsO rplE (requalified) — 50S ribosomal protein L5 rplE rimP (requalified) — ribosome maturation factor RimP rimP rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG sigA (requalified) — RNA polymerase sigma factor sigA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.