MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2779c · 46 genes shown · anchor ald · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv2778c (family_assigned) — SRPBCC family protein Rv2778c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 ald (requalified) — alanine dehydrogenase ald Rv2777c (requalified) — metal-dependent hydrolase Rv2777c kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 gltB (family_assigned) — glutamate synthase large subunit gltB Rv2272 (family_assigned) — YidH family protein Rv2272 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3777 (requalified) — oxidoreductase Rv3777 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv2776c (requalified) — oxidoreductase Rv2776c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR alr (requalified) — alanine racemase alr pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC Rv1188 (requalified) — proline dehydrogenase Rv1188 ephD (family_assigned) — SDR family oxidoreductase ephD desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2300c (requalified) — metallo-hydrolase Rv2300c fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv2273 (dark) — DUF202 domain-containing protein Rv2273 Rv2271 (dark) — DUF2695 domain-containing protein Rv2271 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 lppN (family_assigned) — hypothetical protein lppN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.