MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2778c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2778c (family_assigned) — SRPBCC family protein Rv2778c Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv2777c (requalified) — metal-dependent hydrolase Rv2777c Rv2776c (requalified) — oxidoreductase Rv2776c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv0036c (family_assigned) — TIGR03084 family metal-binding protein Rv0036c ald (requalified) — alanine dehydrogenase ald rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA arfC (family_assigned) — hypothetical protein arfC vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 gltB (family_assigned) — glutamate synthase large subunit gltB pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrE (requalified) — orotate phosphoribosyltransferase pyrE Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 virS (family_assigned) — AraC family transcriptional regulator virS Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 ephD (family_assigned) — SDR family oxidoreductase ephD desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2300c (requalified) — metallo-hydrolase Rv2300c cyp123 (requalified) — cytochrome P450 cyp123 cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS cyp141 (requalified) — cytochrome P450 Cyp141 cyp141 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.