MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2769c · 40 genes shown · anchor PPE43 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE27 (family_assigned) — PE family protein PE27 PE27 PPE43 (family_assigned) — PPE family protein PPE43 PPE43 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 Rv2767c (family_assigned) — hypothetical protein Rv2767c Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA PE27A (family_assigned) — PE family protein PE27A PE27A ldtA (requalified) — L%2CD-transpeptidase LdtMt1 ldtA PE8 (family_assigned) — PE family protein PE8 PE8 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c tyzA (requalified) — hypothetical protein tyzA mbtM (requalified) — long-chain-fatty acid--ACP ligase MbtM mbtM fxsA (family_assigned) — FxsA family protein fxsA tatC (family_assigned) — twin-arginine translocase subunit TatC tatC Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB spmT (requalified) — sphingomyelinase spmT rfbD (family_assigned) — ABC transporter permease rfbD gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA PPE46 (family_assigned) — PPE family protein PPE46 PPE46 esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ esxS (requalified) — ESAT-6 like protein EsxS esxS PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv3015c (requalified) — methionine synthase Rv3015c rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv1140 (family_assigned) — integral membrane protein Rv1140 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.