MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2768c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE43 (family_assigned) — PPE family protein PPE43 PPE43 PE8 (family_assigned) — PE family protein PE8 PE8 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv2767c (family_assigned) — hypothetical protein Rv2767c PE27 (family_assigned) — PE family protein PE27 PE27 Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA yajC (family_assigned) — preprotein translocase subunit YajC yajC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c Rv1535 (family_assigned) — Rv1535 family protein Rv1535 PE31 (family_assigned) — PE family protein PE31 PE31 ldtA (requalified) — L%2CD-transpeptidase LdtMt1 ldtA PPE15 (family_assigned) — PPE family protein PPE15 PPE15 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI PPE41 (family_assigned) — PPE family protein PPE41 PPE41 PE25 (family_assigned) — PE family protein PE25 PE25 fxsA (family_assigned) — FxsA family protein fxsA tatC (family_assigned) — twin-arginine translocase subunit TatC tatC PE27A (family_assigned) — PE family protein PE27A PE27A fas (requalified) — fatty acid synthase fas fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fadE36 (family_assigned) — phosphotransferase family protein fadE36 Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv0945 (requalified) — oxidoreductase Rv0945 gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secD (family_assigned) — protein translocase subunit SecD secD yidC (requalified) — membrane protein insertase YidC yidC secA2 (requalified) — accessory Sec system translocase SecA2 secA2 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.