MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2756c · 37 genes shown · anchor hsdS.1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM hsdS (family_assigned) — restriction endonuclease subunit S hsdS vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 thyX (requalified) — FAD-dependent thymidylate synthase thyX Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA rnj (requalified) — ribonuclease J rnj Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c vapB21 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB21 mrr (requalified) — restriction endonuclease mrr vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 dfrA (requalified) — dihydrofolate reductase dfrA thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purN (requalified) — phosphoribosylglycinamide formyltransferase purN glyA1 (requalified) — serine hydroxymethyltransferase glyA1 dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB asd (requalified) — aspartate-semialdehyde dehydrogenase asd thrA (requalified) — homoserine dehydrogenase thrA lysA (requalified) — diaminopimelate decarboxylase lysA raiA (requalified) — ribosome-associated translation inhibitor RaiA raiA grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv0111 (family_assigned) — acyltransferase family protein Rv0111 deaD (requalified) — DEAD/DEAH box helicase deaD Rv1254 (requalified) — acyltransferase Rv1254 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 Rv2529 (family_assigned) — hypothetical protein Rv2529 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv1048c (dark) — hypothetical protein Rv1048c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.