MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2753c · 46 genes shown · anchor dapB · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB asd (requalified) — aspartate-semialdehyde dehydrogenase asd thrA (requalified) — homoserine dehydrogenase thrA rnj (requalified) — ribonuclease J rnj thyX (requalified) — FAD-dependent thymidylate synthase thyX lysA (requalified) — diaminopimelate decarboxylase lysA dapF (requalified) — diaminopimelate epimerase dapF ask (requalified) — aspartate kinase ask gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC rpsO (requalified) — 30S ribosomal protein S15 rpsO hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM Rv0948c (requalified) — chorismate mutase Rv0948c dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv3707c (requalified) — hypothetical protein Rv3707c thrB (requalified) — homoserine kinase thrB thrC (requalified) — threonine synthase thrC metA (requalified) — homoserine O-acetyltransferase metA Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c raiA (requalified) — ribosome-associated translation inhibitor RaiA raiA grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 dfrA (requalified) — dihydrofolate reductase dfrA thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purN (requalified) — phosphoribosylglycinamide formyltransferase purN glyA1 (requalified) — serine hydroxymethyltransferase glyA1 murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE argS (requalified) — arginine--tRNA ligase argS dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 amiC (requalified) — amidase amiC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.