MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2752c · 45 genes shown · anchor dapA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rnj (requalified) — ribonuclease J rnj dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA thyX (requalified) — FAD-dependent thymidylate synthase thyX hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c raiA (requalified) — ribosome-associated translation inhibitor RaiA raiA grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 rpsK (requalified) — 30S ribosomal protein S11 rpsK thrC (requalified) — threonine synthase thrC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB asd (requalified) — aspartate-semialdehyde dehydrogenase asd thrA (requalified) — homoserine dehydrogenase thrA lysA (requalified) — diaminopimelate decarboxylase lysA dfrA (requalified) — dihydrofolate reductase dfrA thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purN (requalified) — phosphoribosylglycinamide formyltransferase purN glyA1 (requalified) — serine hydroxymethyltransferase glyA1 hsdS (family_assigned) — restriction endonuclease subunit S hsdS vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsS (requalified) — 30S ribosomal protein S19 rpsS phyA (requalified) — presqualene diphosphate synthase HpnD phyA menJ (requalified) — menaquinone reductase menJ Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplD (requalified) — 50S ribosomal protein L4 rplD rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU thrB (requalified) — homoserine kinase thrB ilvA (requalified) — threonine ammonia-lyase ilvA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.