MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2744c · 46 genes shown · anchor clgR · open gene page → · ← back to 1 hop

Evidence: Min score 0
35kd_ag (family_assigned) — hypothetical protein 35kd_ag clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2743c (family_assigned) — hypothetical protein Rv2743c htpX (requalified) — zinc metalloprotease HtpX htpX sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2468c (requalified) — hypothetical protein Rv2468c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv0948c (requalified) — chorismate mutase Rv0948c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2694c (family_assigned) — OB-fold nucleic acid binding domain-containing pro Rv2694c ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 lppL (family_assigned) — hypothetical protein lppL pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv3837c (family_assigned) — histidine phosphatase family protein Rv3837c pepD (requalified) — serine protease PepD pepD menJ (requalified) — menaquinone reductase menJ moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv2180c (family_assigned) — integral membrane protein Rv2180c aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c folE (requalified) — GTP cyclohydrolase I FolE folE folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK folP1 (requalified) — dihydropteroate synthase folP1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.