MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2733c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB Rv2732c (family_assigned) — hypothetical protein Rv2732c miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2880c (family_assigned) — Conserved hypothetical protein Rv2880c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c rphA (requalified) — ribonuclease PH rphA mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rne (family_assigned) — Rne/Rng family ribonuclease rne lepB (requalified) — signal peptidase I lepB Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c lepA (requalified) — translation elongation factor 4 lepA Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX dapF (requalified) — diaminopimelate epimerase dapF pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH cdsA (requalified) — phosphatidate cytidylyltransferase cdsA frr (requalified) — ribosome recycling factor frr Rv2877c (family_assigned) — integral membrane protein Rv2877c rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD pepR (family_assigned) — pitrilysin family protein pepR rplC (requalified) — 50S ribosomal protein L3 rplC rho (requalified) — transcription termination factor Rho rho rplT (requalified) — 50S ribosomal protein L20 rplT hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c fmt (requalified) — methionyl-tRNA formyltransferase fmt

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.