MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2719c · 46 genes shown · anchor lexA · open gene page → · ← back to 1 hop

Evidence: Min score 0
chiZ (requalified) — cell wall hydrolase ChiZ chiZ lexA (requalified) — transcriptional repressor LexA lexA Rv2743c (family_assigned) — hypothetical protein Rv2743c nrdR (family_assigned) — transcriptional regulator NrdR nrdR pirG (requalified) — exported repetitive protein pirG Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv3906c (requalified) — pullulanase Rv3906c Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2876 (requalified) — transmembrane protein Rv2876 Rv0497 (family_assigned) — hypothetical protein Rv0497 recA (requalified) — intein-containing recombinase RecA recA dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv2717c (family_assigned) — FABP family protein Rv2717c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD cinA (requalified) — competence/damage-inducible protein A cinA Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0227c (family_assigned) — membrane protein Rv0227c Rv1476 (family_assigned) — DUF6676 family protein Rv1476 pcnA (requalified) — poly(A) polymerase PcnA pcnA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv3909 (dark) — hypothetical protein Rv3909 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 pncA (requalified) — pyrazinamidase PncA pncA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.