MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2704 · 46 genes shown · anchor sigA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2704 (family_assigned) — RidA family protein Rv2704 sigA (requalified) — RNA polymerase sigma factor sigA fusA1 (requalified) — elongation factor G fusA1 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 rphA (requalified) — ribonuclease PH rphA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c ppgK (family_assigned) — ROK family protein ppgK Rv0021c (family_assigned) — nitronate monooxygenase family protein Rv0021c Rv3005c (family_assigned) — DoxX family protein Rv3005c Rv3916c (requalified) — acetyltransferase Rv3916c Rv3722c (requalified) — aminotransferase Rv3722c Rv3192 (family_assigned) — hypothetical protein Rv3192 Rv0024 (family_assigned) — C40 family peptidase Rv0024 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsL (requalified) — 30S ribosomal protein S12 rpsL rplB (requalified) — 50S ribosomal protein L2 rplB rplD (requalified) — 50S ribosomal protein L4 rplD tuf (requalified) — elongation factor Tu tuf rplC (requalified) — 50S ribosomal protein L3 rplC rpsE (requalified) — 30S ribosomal protein S5 rpsE rplE (requalified) — 50S ribosomal protein L5 rplE rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB pgi (requalified) — glucose-6-phosphate isomerase pgi pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA Rv0650 (family_assigned) — ROK family protein Rv0650 tal (requalified) — transaldolase tal tkt (requalified) — transketolase tkt zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 Rv2781c (requalified) — nitronate monooxygenase Rv2781c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.