MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2703 · 33 genes shown · anchor rpoA · open gene page → · ← back to 1 hop

Evidence: Min score 0
sigA (requalified) — RNA polymerase sigma factor sigA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA carD (requalified) — RNA polymerase-binding transcription factor CarD carD pafC (family_assigned) — YafY family protein pafC zur (requalified) — zinc uptake transcriptional repressor Zur zur Rv2704 (family_assigned) — RidA family protein Rv2704 dnaG (requalified) — DNA primase dnaG sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH helZ (requalified) — DEAD/DEAH box helicase helZ Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c secG (family_assigned) — preprotein translocase subunit SecG secG pafB (family_assigned) — YafY family protein pafB pafA (requalified) — Pup--protein ligase pafA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR fusA1 (requalified) — elongation factor G fusA1 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 rphA (requalified) — ribonuclease PH rphA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c ppgK (family_assigned) — ROK family protein ppgK dnaB (requalified) — replicative DNA helicase dnaB dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt engA (requalified) — ribosome biogenesis GTPase Der engA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.