MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2682c · 43 genes shown · anchor dxr · open gene page → · ← back to 1 hop

Evidence: Min score 0
dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 thiG (requalified) — thiazole synthase thiG lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD Rv2683 (family_assigned) — hypothetical protein Rv2683 ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE arsA (family_assigned) — ArsB/NhaD family transporter arsA tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA rip (requalified) — zinc metalloprotease Rip rip Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c Rv3378c (requalified) — diterpene synthase Rv3378c Rv3377c (requalified) — type B diterpene cyclase Rv3377c thiO (requalified) — glycine oxidase ThiO thiO thiS (requalified) — sulfur carrier protein ThiS thiS thiE (requalified) — thiamine phosphate synthase thiE cysO (requalified) — sulfur carrier protein CysO cysO thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC rpsA (requalified) — 30S ribosomal protein S1 rpsA idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB carD (requalified) — RNA polymerase-binding transcription factor CarD carD rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB cysS1 (requalified) — cysteine--tRNA ligase cysS1 arsB1 (requalified) — arsenic-transport integral membrane protein ArsB arsB1 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA htpG (requalified) — molecular chaperone HtpG htpG Rv1733c (family_assigned) — hypothetical protein Rv1733c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA rpsF (requalified) — 30S ribosomal protein S6 rpsF arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC pepA (family_assigned) — S1C family serine protease pepA ppnK (requalified) — NAD kinase ppnK recN (requalified) — DNA repair protein RecN recN Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv1693 (dark) — hypothetical protein Rv1693 Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 steA (family_assigned) — putative cytokinetic ring protein SteA steA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.