MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2676c · 46 genes shown · anchor hemZ · open gene page → · ← back to 1 hop

Evidence: Min score 0
hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ hemZ (requalified) — ferrochelatase hemZ hemE (requalified) — uroporphyrinogen decarboxylase hemE hemY (requalified) — protoporphyrinogen oxidase hemY Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 Rv2675c (requalified) — class I SAM-dependent methyltransferase Rv2675c Rv2681 (requalified) — ribonuclease D Rv2681 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrC (requalified) — cytochrome c qcrC whiA (family_assigned) — DNA-binding protein WhiA whiA ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv0958 (family_assigned) — ATP-binding protein Rv0958 mmcO (requalified) — multicopper oxidase MmcO mmcO Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c hemC (requalified) — hydroxymethylbilane synthase hemC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2256c (dark) — hypothetical protein Rv2256c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 Rv3707c (requalified) — hypothetical protein Rv3707c rphA (requalified) — ribonuclease PH rphA rpsA (requalified) — 30S ribosomal protein S1 rpsA rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rplD (requalified) — 50S ribosomal protein L4 rplD ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA rapZ (requalified) — RNase adapter RapZ rapZ uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC xerC (requalified) — tyrosine recombinase XerC xerC folE (requalified) — GTP cyclohydrolase I FolE folE folB (requalified) — dihydroneopterin aldolase folB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.