MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2653c · 34 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2653c (requalified) — type II toxin-antitoxin system toxin Rv2653c Rv2652c (requalified) — prophage protein Rv2652c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2650c (requalified) — phage major capsid protein Rv2650c Rv2651c (family_assigned) — HK97 family phage prohead protease Rv2651c vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c vapB17 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB17 Rv1577c (requalified) — phage prohead protease Rv1577c Rv1576c (requalified) — phage major capsid protein Rv1576c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 Rv0836c (family_assigned) — hypothetical protein Rv0836c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv1004c (family_assigned) — hypothetical protein Rv1004c vapC17 (family_assigned) — PIN domain-containing protein vapC17 vapC6 (requalified) — ribonuclease VapC6 vapC6 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 argD (requalified) — acetylornithine transaminase argD argR (requalified) — arginine repressor argR argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.