MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2646 · 46 genes shown · anchor xerC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 Rv2645 (family_assigned) — hypothetical protein Rv2645 Rv2647 (requalified) — hypothetical protein Rv2647 xerC (requalified) — tyrosine recombinase XerC xerC ftsK (requalified) — DNA translocase FtsK ftsK tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv3242c (family_assigned) — ComF family protein Rv3242c apt (requalified) — adenine phosphoribosyltransferase apt Rv1708 (requalified) — initiation inhibitor protein Rv1708 parA (requalified) — chromosome partitioning protein ParA parA Rv3226c (requalified) — SOS response-associated peptidase Rv3226c whiA (family_assigned) — DNA-binding protein WhiA whiA parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB Rv2661c (dark) — hypothetical protein Rv2661c Rv1573 (dark) — hypothetical protein Rv1573 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c Rv3213c (family_assigned) — AAA family ATPase Rv3213c gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid viuB (requalified) — siderophore-interacting protein viuB Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC Rv0948c (requalified) — chorismate mutase Rv0948c pheA (requalified) — prephenate dehydratase pheA Rv1885c (requalified) — chorismate mutase Rv1885c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c hemY (requalified) — protoporphyrinogen oxidase hemY nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK scpA (requalified) — segregation/condensation protein A scpA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC yidD (requalified) — membrane protein insertion efficiency factor YidD yidD aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.