MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2630 · 41 genes shown · anchor rtcB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2630 (requalified) — archease Rv2630 Rv2631 (requalified) — RNA-splicing ligase RtcB Rv2631 Rv2629 (family_assigned) — hypothetical protein Rv2629 Rv0571c (family_assigned) — phosphoribosyltransferase family protein Rv0571c nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv2004c (family_assigned) — AAA family ATPase Rv2004c devS (requalified) — two-component system sensor histidine kinase DevS devS Rv2628 (dark) — hypothetical protein Rv2628 rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD rpsC (requalified) — 30S ribosomal protein S3 rpsC rplW (requalified) — 50S ribosomal protein L23 rplW hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK Rv2005c (requalified) — universal stress protein Rv2005c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv2003c (family_assigned) — hypothetical protein Rv2003c Rv0574c (family_assigned) — CapA family protein Rv0574c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk ctpF (requalified) — cation-transporting P-type ATPase ctpF devR (requalified) — two-component system response regulator DevR devR Rv3134c (requalified) — universal stress protein Rv3134c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv2624c (requalified) — universal stress protein Rv2624c Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c Rv2625c (family_assigned) — site-2 protease family protein Rv2625c TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1254 (requalified) — acyltransferase Rv1254 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.