MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2618 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2618 (family_assigned) — hypothetical protein Rv2618 Rv2617c (family_assigned) — DoxX family membrane protein Rv2617c ahpC (requalified) — peroxiredoxin AhpC ahpC zur (requalified) — zinc uptake transcriptional repressor Zur zur furA (family_assigned) — Fur family transcriptional regulator furA eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI Rv3191c (family_assigned) — IS30 family transposase Rv3191c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c pirG (requalified) — exported repetitive protein pirG cya (requalified) — adenylate cyclase cya Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ahpD (requalified) — alkyl hydroperoxide reductase ahpD trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ katG (requalified) — catalase/peroxidase HPI katG Rv1907c (dark) — hypothetical protein Rv1907c Rv1910c (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein Rv1910c sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 Rv3899c (family_assigned) — hypothetical protein Rv3899c eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2828A (dark) — hypothetical protein Rv2828A ligC (requalified) — ATP-dependent DNA ligase ligC Rv0393 (family_assigned) — hypothetical protein Rv0393 end (requalified) — deoxyribonuclease IV end Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.