MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2615c · 35 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS45 (family_assigned) — PE-PGRS family protein PE_PGRS45 PE_PGRS45 Rv0979c (dark) — hypothetical protein Rv0979c esxF (requalified) — pore-forming CpnT exporter EsxF esxF rpmF (requalified) — 50S ribosomal protein L32 rpmF mazF8 (requalified) — toxin mazF8 Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c esxE (requalified) — ESAT-6 like protein EsxE esxE cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT PE_PGRS17 (family_assigned) — PE-PGRS family protein PE_PGRS17 PE_PGRS17 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 ift (requalified) — necrotizing toxin immunity factor IFT ift Rv3906c (requalified) — pullulanase Rv3906c pcnA (requalified) — poly(A) polymerase PcnA pcnA esxG (requalified) — type VII secretion system protein EsxG esxG rplQ (requalified) — 50S ribosomal protein L17 rplQ rplV (requalified) — 50S ribosomal protein L22 rplV rplT (requalified) — 50S ribosomal protein L20 rplT tuf (requalified) — elongation factor Tu tuf rplP (requalified) — 50S ribosomal protein L16 rplP rpsT (requalified) — 30S ribosomal protein S20 rpsT mazE8 (requalified) — antitoxin MazE8 mazE8 Rv2275 (requalified) — cyclo(L-tyrosyl-L-tyrosyl) synthase Rv2275 cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 vapC6 (requalified) — ribonuclease VapC6 vapC6 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c gmk (requalified) — guanylate kinase gmk nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC bacA (family_assigned) — vitamin B12 ABC transporter ATP-binding protein Ba bacA groES (requalified) — chaperonin GroES groES Rv1362c (family_assigned) — hypothetical protein Rv1362c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.