MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2602 · 46 genes shown · anchor vapB41 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 vapB41 (requalified) — antitoxin VapB41 vapB41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapC6 (requalified) — ribonuclease VapC6 vapC6 vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC15 (family_assigned) — PIN domain nuclease vapC15 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 Rv2828A (dark) — hypothetical protein Rv2828A Rv2828c (family_assigned) — DUF1802 family protein Rv2828c echA16 (requalified) — enoyl-CoA hydratase echA16 Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c vapB38 (requalified) — antitoxin vapB38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB37 (requalified) — antitoxin vapB37 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.