MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2601 · 41 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
speE (requalified) — spermidine synthase speE Rv2600 (family_assigned) — integral membrane protein Rv2600 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 vapB41 (requalified) — antitoxin VapB41 vapB41 vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 lpqP (family_assigned) — PHB depolymerase family esterase lpqP ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 apt (requalified) — adenine phosphoribosyltransferase apt menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA fabH (requalified) — beta-ketoacyl-ACP synthase III fabH sahH (requalified) — adenosylhomocysteinase sahH ctpA (requalified) — heavy metal translocating P-type ATPase ctpA gltB (family_assigned) — glutamate synthase large subunit gltB Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC15 (family_assigned) — PIN domain nuclease vapC15 ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB hsr1 (requalified) — hypothetical protein hsr1 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv0210 (family_assigned) — hypothetical protein Rv0210 end (requalified) — deoxyribonuclease IV end fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 Rv0669c (requalified) — neutral ceramidase Rv0669c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.