MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2592c · 46 genes shown · anchor ruvA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC ligA (requalified) — NAD-dependent DNA ligase LigA ligA clpB (requalified) — chaperone protein ClpB clpB vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 polA (requalified) — DNA polymerase I polA vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA Rv2603c (family_assigned) — YebC/PmpR family DNA-binding transcriptional regul Rv2603c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2600 (family_assigned) — integral membrane protein Rv2600 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu ligB (requalified) — ATP-dependent DNA ligase ligB Rv3015c (requalified) — methionine synthase Rv3015c leuS (requalified) — leucine--tRNA ligase leuS uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 dnaK (requalified) — molecular chaperone DnaK dnaK grpE (requalified) — nucleotide exchange factor GrpE grpE clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB mfd (requalified) — transcription-repair coupling factor mfd uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.