MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2589 · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 aldA (requalified) — aldehyde dehydrogenase aldA gadB (requalified) — glutamate decarboxylase gadB fadB (requalified) — fatty oxidation protein FadB fadB mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB panD (requalified) — aspartate 1-decarboxylase panD panC (requalified) — pantoate--beta-alanine ligase panC Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs ackA (requalified) — acetate kinase ackA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB fadE9 (family_assigned) — acyl-CoA dehydrogenase family protein fadE9 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA9 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA9 Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.