MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2587c · 46 genes shown · anchor secF · open gene page → · ← back to 1 hop

Evidence: Min score 0
secD (family_assigned) — protein translocase subunit SecD secD secF (family_assigned) — protein translocase subunit SecF secF yajC (family_assigned) — preprotein translocase subunit YajC yajC yidC (requalified) — membrane protein insertase YidC yidC Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c secG (family_assigned) — preprotein translocase subunit SecG secG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT apt (requalified) — adenine phosphoribosyltransferase apt secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY relA (family_assigned) — RelA/SpoT family protein relA alaS (requalified) — alanine--tRNA ligase alaS atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA secA2 (requalified) — accessory Sec system translocase SecA2 secA2 rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c oppC (family_assigned) — ABC transporter permease oppC oppB (family_assigned) — ABC transporter permease oppB dppD (family_assigned) — ABC transporter ATP-binding protein dppD oppD (family_assigned) — ABC transporter ATP-binding protein oppD oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA secA1 (family_assigned) — protein translocase subunit SecA secA1 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK nusG (requalified) — transcription termination/antitermination protein nusG rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA rplR (requalified) — 50S ribosomal protein L18 rplR rplE (requalified) — 50S ribosomal protein L5 rplE rpsC (requalified) — 30S ribosomal protein S3 rpsC rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rpsF (requalified) — 30S ribosomal protein S6 rpsF rplU (requalified) — 50S ribosomal protein L21 rplU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.