MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2586c · 46 genes shown · anchor secD · open gene page → · ← back to 1 hop

Evidence: Min score 0
secF (family_assigned) — protein translocase subunit SecF secF secD (family_assigned) — protein translocase subunit SecD secD Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c yajC (family_assigned) — preprotein translocase subunit YajC yajC yidC (requalified) — membrane protein insertase YidC yidC secY (family_assigned) — preprotein translocase subunit SecY secY apt (requalified) — adenine phosphoribosyltransferase apt relA (family_assigned) — RelA/SpoT family protein relA lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT oppC (family_assigned) — ABC transporter permease oppC oppB (family_assigned) — ABC transporter permease oppB dppD (family_assigned) — ABC transporter ATP-binding protein dppD oppD (family_assigned) — ABC transporter ATP-binding protein oppD oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA secA2 (requalified) — accessory Sec system translocase SecA2 secA2 rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rplR (requalified) — 50S ribosomal protein L18 rplR rplE (requalified) — 50S ribosomal protein L5 rplE rpsC (requalified) — 30S ribosomal protein S3 rpsC rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK rpsF (requalified) — 30S ribosomal protein S6 rpsF rplU (requalified) — 50S ribosomal protein L21 rplU rplB (requalified) — 50S ribosomal protein L2 rplB pykA (requalified) — pyruvate kinase pykA trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.