MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2585c · 40 genes shown · anchor secD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c oppC (family_assigned) — ABC transporter permease oppC oppB (family_assigned) — ABC transporter permease oppB dppD (family_assigned) — ABC transporter ATP-binding protein dppD oppD (family_assigned) — ABC transporter ATP-binding protein oppD oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA secD (family_assigned) — protein translocase subunit SecD secD secF (family_assigned) — protein translocase subunit SecF secF yajC (family_assigned) — preprotein translocase subunit YajC yajC apt (requalified) — adenine phosphoribosyltransferase apt relA (family_assigned) — RelA/SpoT family protein relA lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB dppB (family_assigned) — ABC transporter permease dppB dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppA (family_assigned) — ABC transporter substrate-binding protein dppA canA (requalified) — beta-carbonic anhydrase CanA canA yidC (requalified) — membrane protein insertase YidC yidC secG (family_assigned) — preprotein translocase subunit SecG secG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT secY (family_assigned) — preprotein translocase subunit SecY secY secE1 (requalified) — preprotein translocase SecE secE1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK rpsF (requalified) — 30S ribosomal protein S6 rpsF rplU (requalified) — 50S ribosomal protein L21 rplU rplR (requalified) — 50S ribosomal protein L18 rplR rplB (requalified) — 50S ribosomal protein L2 rplB pykA (requalified) — pyruvate kinase pykA rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpmA (requalified) — 50S ribosomal protein L27 rpmA rplM (requalified) — 50S ribosomal protein L13 rplM rplN (requalified) — 50S ribosomal protein L14 rplN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.