MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2563 · 45 genes shown · anchor glnQ · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2563 (family_assigned) — ABC transporter permease Rv2563 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 Rv1157c (dark) — hypothetical protein Rv1157c eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv2561 (family_assigned) — Conserved hypothetical protein Rv2561 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv0393 (family_assigned) — hypothetical protein Rv0393 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 Rv0988 (family_assigned) — lipocalin-like domain-containing protein Rv0988 Rv3000 (family_assigned) — ABC transporter permease Rv3000 Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espB (requalified) — type VII secretion system ESX-1 target EspB espB Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv2411c (requalified) — circularly permuted type 2 ATP-grasp protein Rv2411c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.