MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2562 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 Rv2561 (family_assigned) — Conserved hypothetical protein Rv2561 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv2563 (family_assigned) — ABC transporter permease Rv2563 Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv3728 (requalified) — MFS transporter Rv3728 Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv3239c (requalified) — MFS transporter Rv3239c Rv0998 (family_assigned) — GNAT family N-acetyltransferase Rv0998 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr crp (family_assigned) — cAMP-activated global transcriptional regulator CR crp Rv3899c (family_assigned) — hypothetical protein Rv3899c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv3768 (family_assigned) — nuclear transport factor 2 family protein Rv3768 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv0393 (family_assigned) — hypothetical protein Rv0393 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 Rv1157c (dark) — hypothetical protein Rv1157c eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv2432c (dark) — hypothetical protein Rv2432c Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.