MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2559c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2559c (requalified) — replication-associated recombination protein A Rv2559c Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 Rv2566 (family_assigned) — hypothetical protein Rv2566 nadE (requalified) — NAD(+) synthase nadE cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT lppK (family_assigned) — hypothetical protein lppK Rv2603c (family_assigned) — YebC/PmpR family DNA-binding transcriptional regul Rv2603c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB dinX (requalified) — DNA polymerase IV dinX dinP (requalified) — DNA polymerase IV dinP helZ (requalified) — DEAD/DEAH box helicase helZ papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA3 (requalified) — acyltransferase PapA3 papA3 papA1 (requalified) — acyltransferase PapA1 papA1 Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 Rv2411c (requalified) — circularly permuted type 2 ATP-grasp protein Rv2411c Rv2568c (family_assigned) — putative zinc-binding metallopeptidase Rv2568c Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv2410c (family_assigned) — alpha-E domain-containing protein Rv2410c Rv2409c (family_assigned) — transglutaminase family protein Rv2409c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD cobB (requalified) — NAD-dependent protein deacylase cobB ppnK (requalified) — NAD kinase ppnK sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA nudC (requalified) — NAD(+) diphosphatase nudC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c cysC (requalified) — adenylyl-sulfate kinase cysC pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB tesB2 (requalified) — acyl-CoA thioesterase II tesB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.