MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2557 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv3481c (family_assigned) — GAP family protein Rv3481c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 lprG (requalified) — lipoarabinomannan carrier protein LprG lprG mltG (requalified) — endolytic transglycosylase MltG mltG Rv1888c (family_assigned) — Possible transmembrane protein Rv1888c alaS (requalified) — alanine--tRNA ligase alaS ruvX (requalified) — Holliday junction resolvase RuvX ruvX aroE (requalified) — shikimate dehydrogenase aroE Rv2551c (family_assigned) — A24 family peptidase Rv2551c cut2 (family_assigned) — cutinase family protein cut2 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 pirG (requalified) — exported repetitive protein pirG Rv0312 (family_assigned) — Hsp70 family protein Rv0312 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c Rv2275 (requalified) — cyclo(L-tyrosyl-L-tyrosyl) synthase Rv2275 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX devS (requalified) — two-component system sensor histidine kinase DevS devS devR (requalified) — two-component system response regulator DevR devR nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv2005c (requalified) — universal stress protein Rv2005c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX cyp135B1 (requalified) — cytochrome P450 cyp135B1 Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c ribC (requalified) — riboflavin synthase ribC eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 Rv3415c (family_assigned) — hypothetical protein Rv3415c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.