MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2548 · 41 genes shown · anchor vapB19 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3098A (family_assigned) — PemK-like protein Rv3098A lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA mazF7 (requalified) — mRNA interferase MazF7 mazF7 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 Rv0278c (family_assigned) — PE-PGRS family protein PE_PGRS3 Rv0278c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c mazE7 (requalified) — antitoxin MazE7 mazE7 cobG (requalified) — precorrin-3B synthase cobG cobH (requalified) — precorrin-8X methylmutase cobH cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ mazF1 (requalified) — toxin MazF1 mazF1 vapB37 (requalified) — antitoxin vapB37 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3479 (requalified) — transmembrane protein Rv3479

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.