MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2546 · 41 genes shown · anchor vapB18 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1770 (family_assigned) — hypothetical protein Rv1770 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2209 (requalified) — MFS transporter Rv2209 iniB (requalified) — isoniazid-induced protein IniB iniB eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv1769 (requalified) — amino acid deaminase/aldolase Rv1769 Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 lipT (requalified) — carboxylesterase LipT lipT espE (requalified) — type VII secretion system ESX-1 associated protein espE vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.