MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2542 · 45 genes shown · anchor eccD1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 iniB (requalified) — isoniazid-induced protein IniB iniB eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv1157c (dark) — hypothetical protein Rv1157c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv1004c (family_assigned) — hypothetical protein Rv1004c espI (family_assigned) — MinD/ParA family protein espI mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espB (requalified) — type VII secretion system ESX-1 target EspB espB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW espF (requalified) — type VII secretion system ESX-1 associated protein espF iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3364c (requalified) — serine protease inhibitor Rv3364c mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.