MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2540c · 36 genes shown · anchor aroB · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroF (requalified) — chorismate synthase aroF aroB (requalified) — 3-dehydroquinate synthase aroB aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroK (requalified) — shikimate kinase AroK aroK Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c trpE (requalified) — anthranilate synthase component I trpE aroD (requalified) — type II 3-dehydroquinate dehydratase aroD mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c aroE (requalified) — shikimate dehydrogenase aroE aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG cmk (requalified) — (d)CMP kinase cmk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA mltG (requalified) — endolytic transglycosylase MltG mltG Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 pta (requalified) — phosphate acetyltransferase pta sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA mbtB (requalified) — phenyloxazoline synthase MbtB mbtB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv0812 (requalified) — 4-amino-4-deoxychorismate lyase Rv0812 Rv2551c (family_assigned) — A24 family peptidase Rv2551c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.