MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2537c · 46 genes shown · anchor aroB · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroD (requalified) — type II 3-dehydroquinate dehydratase aroD aroB (requalified) — 3-dehydroquinate synthase aroB aroE (requalified) — shikimate dehydrogenase aroE aroK (requalified) — shikimate kinase AroK aroK aroF (requalified) — chorismate synthase aroF mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC secG (family_assigned) — preprotein translocase subunit SecG secG mltG (requalified) — endolytic transglycosylase MltG mltG pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ ruvX (requalified) — Holliday junction resolvase RuvX ruvX tig (requalified) — trigger factor tig Rv2541 (dark) — hypothetical protein Rv2541 aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC mbtB (requalified) — phenyloxazoline synthase MbtB mbtB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY yidC (requalified) — membrane protein insertase YidC yidC secA1 (family_assigned) — protein translocase subunit SecA secA1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY alaS (requalified) — alanine--tRNA ligase alaS Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 efp (requalified) — elongation factor P efp Rv2532c (requalified) — antitermination protein NusB Rv2532c nusB (requalified) — transcription antitermination factor NusB nusB Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 Rv2531c (requalified) — amino acid decarboxylase Rv2531c nadE (requalified) — NAD(+) synthase nadE Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rplC (requalified) — 50S ribosomal protein L3 rplC rplM (requalified) — 50S ribosomal protein L13 rplM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.