MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2536 · 46 genes shown · anchor pepQ · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ efp (requalified) — elongation factor P efp nusB (requalified) — transcription antitermination factor NusB nusB Rv2532c (requalified) — antitermination protein NusB Rv2532c Rv2531c (requalified) — amino acid decarboxylase Rv2531c vapB39 (requalified) — antitoxin VapB39 vapB39 Rv1508c (family_assigned) — glycosyltransferase 87 family protein Rv1508c lipM (family_assigned) — alpha/beta hydrolase lipM Rv3707c (requalified) — hypothetical protein Rv3707c Rv2304c (dark) — hypothetical protein Rv2304c Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c narK3 (requalified) — nitrate/nitrite transporter narK3 nadE (requalified) — NAD(+) synthase nadE rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH Rv1722 (requalified) — biotin carboxylase Rv1722 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv1508A (family_assigned) — hypothetical protein Rv1508A Rv1509 (family_assigned) — methyltransferase domain-containing protein Rv1509 Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv1516c (requalified) — glycosyltransferase Rv1516c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv2283 (dark) — hypothetical protein Rv2283 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c rpmD (requalified) — 50S ribosomal protein L30 rpmD lipI (family_assigned) — alpha/beta hydrolase lipI pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd lpqF (requalified) — serine hydrolase lpqF Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c Rv2305 (family_assigned) — hypothetical protein Rv2305

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.