MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2531c · 46 genes shown · anchor vapB39 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2531c (requalified) — amino acid decarboxylase Rv2531c vapB39 (requalified) — antitoxin VapB39 vapB39 arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH Rv1722 (requalified) — biotin carboxylase Rv1722 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 nusB (requalified) — transcription antitermination factor NusB nusB Rv2532c (requalified) — antitermination protein NusB Rv2532c efp (requalified) — elongation factor P efp pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ ndhA (requalified) — NAD(P)/FAD-dependent oxidoreductase ndhA moxR3 (family_assigned) — MoxR family ATPase moxR3 argF (requalified) — ornithine carbamoyltransferase argF argG (requalified) — argininosuccinate synthase argG Rv1000c (family_assigned) — hypothetical protein Rv1000c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 argB (requalified) — acetylglutamate kinase argB argD (requalified) — acetylornithine transaminase argD argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argR (requalified) — arginine repressor argR accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 Rv1723 (requalified) — serine hydrolase Rv1723 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA fas (requalified) — fatty acid synthase fas vapB11 (requalified) — antitoxin VapB11 vapB11 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c ilvA (requalified) — threonine ammonia-lyase ilvA vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD nadE (requalified) — NAD(+) synthase nadE Rv0393 (family_assigned) — hypothetical protein Rv0393 ppa (requalified) — inorganic diphosphatase ppa gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.