MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2530c · 46 genes shown · anchor vapB39 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapB39 (requalified) — antitoxin VapB39 vapB39 Rv2531c (requalified) — amino acid decarboxylase Rv2531c pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ nusB (requalified) — transcription antitermination factor NusB nusB Rv2532c (requalified) — antitermination protein NusB Rv2532c efp (requalified) — elongation factor P efp Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH Rv1722 (requalified) — biotin carboxylase Rv1722 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 nadE (requalified) — NAD(+) synthase nadE rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 ychF (requalified) — redox-regulated ATPase YchF ychF Rv1115 (family_assigned) — hypothetical protein Rv1115 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.