MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2529 · 41 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2529 (family_assigned) — hypothetical protein Rv2529 topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rplA (requalified) — 50S ribosomal protein L1 rplA recA (requalified) — intein-containing recombinase RecA recA helZ (requalified) — DEAD/DEAH box helicase helZ lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv1947 (family_assigned) — hypothetical protein Rv1947 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c deaD (requalified) — DEAD/DEAH box helicase deaD Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c ligC (requalified) — ATP-dependent DNA ligase ligC rplO (requalified) — 50S ribosomal protein L15 rplO rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rplJ (requalified) — 50S ribosomal protein L10 rplJ rplV (requalified) — 50S ribosomal protein L22 rplV rpmC (requalified) — 50S ribosomal protein L29 rpmC recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2133c (family_assigned) — SCO1664 family protein Rv2133c dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA ligB (requalified) — ATP-dependent DNA ligase ligB dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dinG (requalified) — ATP-dependent helicase DinG dinG Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.