MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2527 · 46 genes shown · anchor vapB17 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC17 (family_assigned) — PIN domain-containing protein vapC17 vapB17 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB17 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 mrr (requalified) — restriction endonuclease mrr efp (requalified) — elongation factor P efp vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 Rv2035 (family_assigned) — SRPBCC family protein Rv2035 mazE9 (requalified) — antitoxin MazE9 mazE9 vapC6 (requalified) — ribonuclease VapC6 vapC6 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 argD (requalified) — acetylornithine transaminase argD argR (requalified) — arginine repressor argR argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv1950c (dark) — hypothetical protein Rv1950c Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 gltB (family_assigned) — glutamate synthase large subunit gltB mrsA (requalified) — phosphoglucosamine mutase mrsA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2548A (dark) — hypothetical protein Rv2548A vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.