MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2525c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv3668c (requalified) — protease Rv3668c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD pirG (requalified) — exported repetitive protein pirG Rv1158c (dark) — hypothetical protein Rv1158c Rv3847 (requalified) — peptidase Rv3847 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC fas (requalified) — fatty acid synthase fas Rv0531 (family_assigned) — DUF4229 domain-containing protein Rv0531 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv3802c (requalified) — phospholipase Rv3802c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv1565c (family_assigned) — acyltransferase family protein Rv1565c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pimE (requalified) — mannosyltransferase pimE eno (requalified) — phosphopyruvate hydratase eno sodA (requalified) — superoxide dismutase sodA Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0822c (family_assigned) — LCP family protein Rv0822c aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.