MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2518c · 46 genes shown · anchor glfT2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB Rv3015c (requalified) — methionine synthase Rv3015c dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 Rv0813c (family_assigned) — FABP family protein Rv0813c Rv1312 (family_assigned) — DUF2550 domain-containing protein Rv1312 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv0948c (requalified) — chorismate mutase Rv0948c lpqA (family_assigned) — sensor domain-containing protein lpqA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c ligA (requalified) — NAD-dependent DNA ligase LigA ligA metK (requalified) — S-adenosylmethionine synthetase metK ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv0192 (family_assigned) — hypothetical protein Rv0192 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI Rv3329 (requalified) — aminotransferase Rv3329 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 glf (requalified) — UDP-galactopyranose mutase glf ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD sepIVA (requalified) — cell division protein SepIVA sepIVA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.